From 4101eb9185c5c9a52187e62bc9a466b5cdadc33d Mon Sep 17 00:00:00 2001
From: Tamas Gal <himself@tamasgal.com>
Date: Mon, 9 Sep 2024 14:37:28 +0200
Subject: [PATCH] Add fibonaccifit script

---
 fibonaccifit/Dockerfile      |   11 +
 fibonaccifit/Manifest.toml   | 2205 ++++++++++++++++++++++++++++++++++
 fibonaccifit/Project.toml    |   12 +
 fibonaccifit/fibonaccifit.jl |   91 ++
 4 files changed, 2319 insertions(+)
 create mode 100644 fibonaccifit/Dockerfile
 create mode 100644 fibonaccifit/Manifest.toml
 create mode 100644 fibonaccifit/Project.toml
 create mode 100644 fibonaccifit/fibonaccifit.jl

diff --git a/fibonaccifit/Dockerfile b/fibonaccifit/Dockerfile
new file mode 100644
index 0000000..c047e2e
--- /dev/null
+++ b/fibonaccifit/Dockerfile
@@ -0,0 +1,11 @@
+FROM julia:1.10
+LABEL maintainer="Tamas Gal <tgal@km3net.de>"
+
+ WORKDIR /reco
+ RUN apt-get -y update && apt-get -y install build-essential && apt-get clean
+
+ COPY Project.toml .
+ RUN julia -e 'using Pkg; Pkg.Registry.add(); Pkg.Registry.add(RegistrySpec(url="https://git.km3net.de/common/julia-registry")); Pkg.activate("."); Pkg.instantiate(); Pkg.build("NeRCA"); Pkg.test("NeRCA")'
+
+# COPY fibonaccifit.jl ./src/fibonaccifit.jl
+ ENTRYPOINT ["julia", "--project=.", "src/fibonaccifit.jl"]
diff --git a/fibonaccifit/Manifest.toml b/fibonaccifit/Manifest.toml
new file mode 100644
index 0000000..5348a9f
--- /dev/null
+++ b/fibonaccifit/Manifest.toml
@@ -0,0 +1,2205 @@
+# This file is machine-generated - editing it directly is not advised
+
+julia_version = "1.10.2"
+manifest_format = "2.0"
+project_hash = "d68def52e28249df9fbf6fd619e8bd46189831cb"
+
+[[deps.AbstractFFTs]]
+deps = ["LinearAlgebra"]
+git-tree-sha1 = "d92ad398961a3ed262d8bf04a1a2b8340f915fef"
+uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
+version = "1.5.0"
+weakdeps = ["ChainRulesCore", "Test"]
+
+    [deps.AbstractFFTs.extensions]
+    AbstractFFTsChainRulesCoreExt = "ChainRulesCore"
+    AbstractFFTsTestExt = "Test"
+
+[[deps.AbstractTrees]]
+git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177"
+uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
+version = "0.4.5"
+
+[[deps.Accessors]]
+deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown", "Test"]
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+uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697"
+version = "0.1.37"
+
+    [deps.Accessors.extensions]
+    AccessorsAxisKeysExt = "AxisKeys"
+    AccessorsIntervalSetsExt = "IntervalSets"
+    AccessorsStaticArraysExt = "StaticArrays"
+    AccessorsStructArraysExt = "StructArrays"
+    AccessorsUnitfulExt = "Unitful"
+
+    [deps.Accessors.weakdeps]
+    AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5"
+    IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953"
+    Requires = "ae029012-a4dd-5104-9daa-d747884805df"
+    StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
+    StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a"
+    Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"
+
+[[deps.Adapt]]
+deps = ["LinearAlgebra", "Requires"]
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+    AdaptStaticArraysExt = "StaticArrays"
+
+[[deps.AdaptivePredicates]]
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+
+    [deps.ArraysOfArrays.extensions]
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+    ArraysOfArraysChainRulesCoreExt = "ChainRulesCore"
+    ArraysOfArraysStaticArraysCoreExt = "StaticArraysCore"
+
+[[deps.Artifacts]]
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+    [deps.Distributions.weakdeps]
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diff --git a/fibonaccifit/Project.toml b/fibonaccifit/Project.toml
new file mode 100644
index 0000000..d743b7d
--- /dev/null
+++ b/fibonaccifit/Project.toml
@@ -0,0 +1,12 @@
+[deps]
+CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
+DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
+FHist = "68837c9b-b678-4cd5-9925-8a54edc8f695"
+Healpix = "9f4e344d-96bc-545a-84a3-ae6b9e1b672b"
+KM3io = "2cab5852-6f21-4982-99b0-6a4792870cfb"
+LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
+Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a"
+NeRCA = "89b7c20c-a96a-11e9-35df-35fba0891eb2"
+StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
+Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
+StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
diff --git a/fibonaccifit/fibonaccifit.jl b/fibonaccifit/fibonaccifit.jl
new file mode 100644
index 0000000..9ac3a8f
--- /dev/null
+++ b/fibonaccifit/fibonaccifit.jl
@@ -0,0 +1,91 @@
+#!/usr/bin/env julia
+
+if length(ARGS) != 2
+    println("Usage: ./fibonaccifit.jl LIGIER_HOST LIGIER_PORT")
+    exit(1)
+end
+
+println("Initialising libraries, this may take a minute...")
+using Sockets
+using KM3io
+using NeRCA
+using CairoMakie
+
+const LIGIER_HOST = getalladdrinfo(ARGS[1])[1]
+const LIGIER_PORT = parse(Int, ARGS[2])
+
+function main()
+    println("Starting live FibonacciFit")
+
+    detector = Detector("/data/ffit.datx")
+    @show detector
+    fig_indices = Dict{Int, Tuple{Int, Int}}()
+    row = 1
+    col = 1
+    for s in detector.strings
+        if col > 6
+            row += 1
+            col = 1
+        end
+        fig_indices[s] = (row, col)
+        col += 1
+    end
+
+    msfparams = MuonScanfitParameters(;tmaxlocal=18.0, roadwidth=200.0, nfits=12)
+    msfit = MuonScanfit(msfparams, detector)
+    @show msfparams
+
+    idx = 0
+    for event in CHClient{KM3io.DAQEvent}(LIGIER_HOST, LIGIER_PORT)
+        idx += 1
+        muons = msfit(event.snapshot_hits)
+        best_fit = first(muons)
+        flag = "."
+        if best_fit.Q > 0
+            flag = "+"
+            chits = calibrate(detector, event.snapshot_hits)
+            if best_fit.dir.z > 0
+                flag = "U"
+                fig = Figure(size=(600,400))
+                for s in detector.strings
+                    col, row = fig_indices[s]
+                    _chits = filter(h->h.string == s, chits)
+                    ts = [h.t for h in _chits]
+                    zs = [h.pos.z for h in _chits]
+                    ax = Axis(fig[col, row])
+                    scatter!(ax, ts, zs)
+                end
+                save("/plots/ztplot_ffit.png", fig)
+            end
+            if best_fit.dir.z < -0.99
+                flag = "T"
+                write_timeresiduals("/data/reco_timeres.csv", event.header.run, best_fit, chits)
+            end
+        end
+        print(flag)
+        if idx % 80 == 0
+            println()
+            flush(stdout)
+        end
+    end
+end
+
+
+function write_timeresiduals(fname::AbstractString, run_id, fit, calibrated_hits)
+    if !isfile(fname)
+        fobj = open(fname, "w")
+        write(fobj, "run,timestamp,du,floor,dom_id,t_res,Q\n")
+    else
+        fobj = open(fname, "a")
+    end
+    t = Int(round(time()))
+    for hit in calibrated_hits
+        cphoton = cherenkov(fit, hit)
+        cphoton.d_closest > 100 && continue  # skip DOMs which are too far away
+        write(fobj, "$(run_id),$(t),$(hit.string),$(hit.floor),$(hit.dom_id),$(cphoton.Δt),$(fit.Q)\n")
+    end
+    flush(fobj)
+end
+
+
+main()
-- 
GitLab