From 0195e35607ed83d8dd37084c56057b526c66d384 Mon Sep 17 00:00:00 2001
From: Stefan Reck <stefan.reck@fau.de>
Date: Mon, 25 Jan 2021 11:49:34 +0100
Subject: [PATCH] abspath for concatenate
---
orcasong/tools/concatenate.py | 2 ++
1 file changed, 2 insertions(+)
diff --git a/orcasong/tools/concatenate.py b/orcasong/tools/concatenate.py
index 74f9d74..4f3ed15 100644
--- a/orcasong/tools/concatenate.py
+++ b/orcasong/tools/concatenate.py
@@ -1,3 +1,4 @@
+import os
import time
import h5py
import numpy as np
@@ -177,6 +178,7 @@ class FileConcatenator:
errors, rows_per_file, valid_input_files = [], [0], []
for i, file_name in enumerate(input_files, start=1):
+ file_name = os.path.abspath(file_name)
try:
rows_this_file = _get_rows(file_name, keys_stripped)
except Exception as e:
--
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